His profile is different than the guy who was let go from the DBacks all those years ago, and even with the scandal he is probably held in somewhat higher esteem baseball wise than he was at that time as well.
My thing is that, for as much as we complain (justifiably) about the job the FO has had, he's really not in a bad spot with this team. The reporting has been that he is more involved with front office decisions than most managers, which is not insignificant in an era where the going assumption is that managers are more irrelevant than ever. Not to mention that the front office just did a major overhaul of the minor leagues to be more data driven, which fits his profile as well.
That was the point being made in the first post: this may not that be a bad gig for him. Particularly in a sport where Belichick-types don't really exist. And he's not likely to get it elsewhere.